1LWL

Crystal Structure of Cytochrome P450-cam with a Fluorescent Probe D-8-Ad (Adamantane-1-carboxylic acid-5-dimethylamino-naphthalene-1-sulfonylamino-octyl-amide)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1LWL

Classification: OXIDOREDUCTASE

Total Structure Weight: 48117.62

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome P450-cam A 417 Pseudomonas putida EC#: 1.14.15.1 IUBMB
Gene Name(s): camC cyp101
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DSO
Query on DSO

A ADAMANTANE-1-CARBOXYLIC ACID-5-DIMETHYLAMINO- NAPHTHALENE-1-SULFONYLAMINO-OCTYL-AMIDE
C31 H45 N3 O3 S
FZFMMSSQQXCBGM-HTNXFJBJSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DSO N/A in BindingDB
Kd: 20 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.202
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 64.96 α = 90.00
b = 75.31 β = 90.00
c = 93.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-31
  • Released Date: 2002-12-18
  • Deposition author(s): Dunn, A.R., Hays, A.M., Goodin, D.B., Stout, C.D., Chiu, R., Winkler, J.R., Gray, H.B.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance