1LU5

2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA Duplex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.235

Literature

Macromolecules
Sequence Display for 1LU5

Classification: DNA

Total Structure Weight: 15276.13

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3' A, C 12 synthetic
5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3' B, D 12 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LPT
Query on LPT

A, C CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX
C6 H16 N2 Pt
QJZANKJSFCKQEM-FAMBLFRQAF
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.235
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 31.64 α = 79.53
b = 35.64 β = 83.02
c = 46.56 γ = 81.36

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-21
  • Released Date: 2002-12-20
  • Deposition author(s): Silverman, A.P., Bu, W., Cohen, S.M., Lippard, S.J.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance
  • 2012-02-08
    Type: Derived calculations