1LSV

Crystal structure of the CO-bound BjFixL heme domain

Structural Biology Knowledgebase: 1LSV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 1LSV

Classification: TRANSFERASE

Total Structure Weight: 15564.49

Macromolecule Entities
Molecule Chains Length Organism Details
Sensor protein FixL A 131 Bradyrhizobium japonicum EC#: 2.7.13.3 IUBMB
Fragment: Heme domain (residues 141-270)
Gene Name(s): fixL bll2760
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CMO
Query on CMO

A CARBON MONOXIDE
C O
UGFAIRIUMAVXCW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.215
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 127.01 α = 90.00
b = 127.01 β = 90.00
c = 58.14 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-19
  • Released Date: 2002-11-20
  • Deposition author(s): Hao, B., Isaza, C., Arndt, J., Soltis, M., Chan, M.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4