1LQW

Crystal Structure of S.aureus Peptide Deformylase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.231

Literature

Macromolecules
Sequence Display for 1LQW

Classification: HYDROLASE

Total Structure Weight: 41308.21

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDE DEFORMYLASE PDF1 A, B 183 Staphylococcus aureus EC#: 3.5.1.88 IUBMB
Gene Name(s): def def1 pdf1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.231
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 48.21 α = 90.00
b = 42.19 β = 98.67
c = 101.67 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-14
  • Released Date: 2002-07-24
  • Deposition author(s): Mikol, V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4