1LKO

Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(II) form

Structural Biology Knowledgebase: 1LKO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1LKO

Classification: ELECTRON TRANSPORT

Total Structure Weight: 21745.01

Macromolecule Entities
Molecule Chains Length Organism Details
Rubrerythrin all-iron(II) form A 191 Desulfovibrio vulgaris Gene Name(s): rbr DVU_3094
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.183
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 48.52 α = 90.00
b = 79.95 β = 90.00
c = 100.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-25
  • Released Date: 2002-09-18
  • Deposition author(s): Jin, S., Kurtz Jr., D.M., Liu, Z.J., Rose, J., Wang, B.C.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4