1LI4

Human S-adenosylhomocysteine hydrolase complexed with neplanocin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1LI4

Classification: HYDROLASE

Total Structure Weight: 48821.84

Macromolecule Entities
Molecule Chains Length Organism Details
S-adenosylhomocysteine hydrolase A 432 Homo sapiens EC#: 3.3.1.1 IUBMB
Gene Name(s): AHCY Gene View SAHH
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NOC
Query on NOC

A 3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE- 1,2-DIOL
NEPLANOCIN (Synonym)
C11 H15 N5 O3
UGRNVLGKAGREKS-FAYXRDSDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.197
  • Space Group: F 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 92.83 α = 90.00
b = 135.67 β = 90.00
c = 171.49 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-17
  • Released Date: 2003-05-20
  • Deposition author(s): Yang, X., Hu, Y., Yin, D.H., Turner, M.A., Wang, M., Borchardt, R.T., Howell, P.L., Kuczera, K., Schowen, R.L.

Revision History

  • 2008-04-28
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance