1LFW

Crystal structure of pepV

Structural Biology Knowledgebase: 1LFW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Work: 0.174

Literature

Macromolecules
Sequence Display for 1LFW

Classification: HYDROLASE

Total Structure Weight: 52415.65

Macromolecule Entities
Molecule Chains Length Organism Details
pepV A 470 Lactobacillus delbrueckii EC#: 3.4.13.3 IUBMB
Gene Name(s): pepV
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AEP
Query on AEP

A 3-[(1-AMINO-2-CARBOXY-ETHYL)-HYDROXY-PHOSPHINOYL]- 2-METHYL-PROPIONIC ACID
C7 H14 N O6 P
NJOTXUMMTTYQMQ-RFZPGFLSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed:
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 67.15 α = 90.00
b = 77.03 β = 90.00
c = 89.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-12
  • Released Date: 2002-10-23
  • Deposition author(s): Jozic, D., Bourenkow, G., Bartunik, H., Scholze, H., Dive, V., Henrich, B., Huber, R., Bode, W., Maskos, K.

Revision History

  • 2014-03-19
    Type: Source and taxonomy | Details: update source organism
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4