1LF8

Complex of GGA3-VHS Domain and CI-MPR C-terminal Phosphopeptide

Structural Biology Knowledgebase: 1LF8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1LF8

Classification: SIGNALING PROTEIN

Total Structure Weight: 84080.32

Macromolecule Entities
Molecule Chains Length Organism Details
ADP-ribosylation factor binding protein GGA3 A, B, C, D 171 Homo sapiens Fragment: VHS domain (residues 1-166)
Gene Name(s): GGA3 Gene View KIAA0154
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Cation-independent mannose-6-phosphate receptor E, F, G, H 12 Homo sapiens Fragment: C-terminus (residues 2480-2491)
Mutation: S305X
Gene Name(s): IGF2R Gene View MPRI
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SEP
Query on SEP
E, F, G, H L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.211
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 124.54 α = 90.00
b = 129.70 β = 90.00
c = 108.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-10
  • Released Date: 2002-06-26
  • Deposition author(s): Kato, Y., Misra, S., Puertollano, R., Hurley, J.H., Bonifacino, J.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4