1LE7

CARBOXYLIC ESTER HYDROLASE, C 2 2 21 space group

Structural Biology Knowledgebase: 1LE7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1LE7

Classification: HYDROLASE

Total Structure Weight: 27960.21

Macromolecule Entities
Molecule Chains Length Organism Details
Group X Secretory Phospholipase A2 A, B 123 Homo sapiens EC#: 3.1.1.4 IUBMB
Gene Name(s): PLA2G10 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.211
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 139.06 α = 90.00
b = 145.10 β = 90.00
c = 28.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-04-09
  • Released Date: 2002-08-14
  • Deposition author(s): Pan, Y.H., Jain, M.K., Bahnson, B.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4