1LD9

THE THREE-DIMENSIONAL STRUCTURE OF AN H-2LD PEPTIDE COMPLEX EXPLAINS THE UNIQUE INTERACTION OF LD WITH BETA2M AND PEPTIDE

Structural Biology Knowledgebase: 1LD9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 1LD9

Classification: MAJOR HISTOCOMPATIBILITY COMPLEX

Total Structure Weight: 87574.69

Macromolecule Entities
Molecule Chains Length Organism Details
MHC CLASS I H-2LD HEAVY CHAIN A, D 268 Mus musculus Fragment: EXTRACELLULAR DOMAINS
Gene Name(s): H2-L
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
BETA-2 MICROGLOBULIN B, E 99 Mus musculus Gene Name(s): B2m
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
NANO-PEPTIDE C, F 9 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.186
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 150.10 α = 90.00
b = 87.20 β = 90.00
c = 80.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-04-24
  • Released Date: 1998-05-06
  • Deposition author(s): Balendiran, G.K., Solheim, J.C., Young, A.C.M., Hansen, T.H., Nathenson, S.G., Sacchettini, J.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4