1L7P

SUBSTRATE BOUND PHOSPHOSERINE PHOSPHATASE COMPLEX STRUCTURE

Structural Biology Knowledgebase: 1L7P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1L7P

Classification: HYDROLASE

Total Structure Weight: 48109.21

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOSERINE PHOSPHATASE A, B 211 Methanocaldococcus jannaschii EC#: 3.1.3.3 IUBMB
Mutation: M1M, D11N, M43M, M174M
Gene Name(s): MJ1594
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SEP
Query on SEP

A, B PHOSPHOSERINE
PHOSPHONOSERINE (Synonym)
C3 H8 N O6 P
BZQFBWGGLXLEPQ-REOHCLBHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.229
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.80 α = 90.00
b = 70.43 β = 90.00
c = 90.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-16
  • Released Date: 2002-06-19
  • Deposition author(s): Wang, W., Cho, H.S., Kim, R., Jancarik, J., Yokota, H., Nguyen, H.H., Grigoriev, I.V., Wemmer, D.E., Kim, S.H., Berkeley Structural Genomics Center (BSGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4