1L1D

Crystal structure of the C-terminal methionine sulfoxide reductase domain (MsrB) of N. gonorrhoeae pilB

Structural Biology Knowledgebase: 1L1D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1L1D

Classification: OXIDOREDUCTASE

Total Structure Weight: 34452.35

Macromolecule Entities
Molecule Chains Length Organism Details
peptide methionine sulfoxide reductase A, B 152 Neisseria gonorrhoeae EC#: 1.8.4.13 IUBMB 1.8.4.14 IUBMB
Fragment: MsrB domain, C-terminal domain
Gene Name(s): msrAB pilB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CAC
Query on CAC

A, B CACODYLATE ION
dimethylarsinate (Synonym)
C2 H6 As O2
OGGXGZAMXPVRFZ-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.207
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 67.35 α = 90.00
b = 68.08 β = 90.00
c = 62.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-15
  • Released Date: 2002-05-01
  • Deposition author(s): Lowther, W.T., Weissbach, H., Etienne, F., Brot, N., Matthews, B.W.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4