1KZ7

Crystal Structure of the DH/PH Fragment of Murine Dbs in Complex with the Placental Isoform of Human Cdc42

Structural Biology Knowledgebase: 1KZ7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1KZ7

Classification: SIGNALING PROTEIN

Total Structure Weight: 125305.52

Macromolecule Entities
Molecule Chains Length Organism Details
GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS A, C 353 Mus musculus Fragment: DH/PH fragment (residues 623-967)
Mutation: M637M, M662M, M667M, M686M, N696I, I697F, P698L, A699R, G700E, V701L, M719M, M782M, M813M, M833M, M859M, M897M, E940A
Gene Name(s): Mcf2l Dbs
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CDC42 HOMOLOG B, D 188 Homo sapiens Fragment: residues 1-188
Mutation: C188S
Details: PLACENTAL ISOFORM
Gene Name(s): CDC42 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.50 α = 90.00
b = 87.98 β = 90.00
c = 230.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-06
  • Released Date: 2002-03-20
  • Deposition author(s): Rossman, K.L., Worthylake, D.K., Snyder, J.T., Siderovski, D.P., Campbell, S.L., Sondek, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4