1KU0

Structure of the Bacillus stearothermophilus L1 lipase

Structural Biology Knowledgebase: 1KU0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1KU0

Classification: HYDROLASE

Total Structure Weight: 86596.12

Macromolecule Entities
Molecule Chains Length Organism Details
L1 lipase A, B 388 Geobacillus stearothermophilus EC#: 3.1.1.3 IUBMB
Fragment: residues 30-417(seq db number)
Mutation: N84K, D85H, K355N
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.185
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 119.62 α = 90.00
b = 85.04 β = 99.73
c = 98.36 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-01-18
  • Released Date: 2002-08-21
  • Deposition author(s): Jeong, S.-T., Kim, H.-K., Kim, S.-J., Chi, S.-W., Pan, J.-G., Oh, T.-K., Ryu, S.-E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4