1KSE

Solution Structure of a quinolone-capped DNA duplex

Structural Biology Knowledgebase: 1KSE SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: Closest to the Average

Literature

Macromolecules
Sequence Display for 1KSE

Classification: DNA

Total Structure Weight: 3979.00

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*(5AT)P*GP*CP*GP*CP*A)-3' A, B 6 synthetic Quinolone-DNA hybrid

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OXI
Query on OXI

A, B OXOLINIC ACID
C13 H11 N O5
KYGZCKSPAKDVKC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
5AT
Query on 5AT
A, B DNA LINKING C10 H15 N3 O4 DT

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: closest to the average

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2002-01-12
  • Released Date: 2002-05-08
  • Deposition author(s): Tuma, J., Connors, W.H., Stitelman, D.H., Richert, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4