1KNL

Streptomyces lividans Xylan Binding Domain cbm13

Structural Biology Knowledgebase: 1KNL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.166
  • R-Value Work: 0.139

Literature

Macromolecules
Sequence Display for 1KNL

Classification: HYDROLASE

Total Structure Weight: 13793.01

Macromolecule Entities
Molecule Chains Length Organism Details
ENDO-1,4-BETA-XYLANASE A A 130 Streptomyces lividans EC#: 3.2.1.8 IUBMB
Fragment: carbohydrate binding module (residues 348-477)
Gene Name(s): xlnA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.166
  • R-Value Work: 0.139
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 55.95 α = 90.00
b = 55.95 β = 90.00
c = 97.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-19
  • Released Date: 2002-06-19
  • Deposition author(s): Notenboom, V., Boraston, A.B., Williams, S.J., Kilburn, D.G., Rose, D.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update