1KK9

CRYSTAL STRUCTURE OF E. COLI YCIO

Structural Biology Knowledgebase: 1KK9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1KK9

Classification: UNKNOWN FUNCTION

Total Structure Weight: 25286.87

Macromolecule Entities
Molecule Chains Length Organism Details
probable translation factor yciO A 221 Escherichia coli Mutation: M-11M, M1M, M50M, M68M, M89M, M121M, M140M, M146M
Gene Name(s): yciO b1267 JW5196
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.213
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.40 α = 90.00
b = 68.77 β = 90.00
c = 94.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-06
  • Released Date: 2002-12-11
  • Deposition author(s): Jia, J., Lunin, V.V., Sauve, V., Huang, L.-W., Matte, A., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4