1KJ1

MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM GARLIC (ALLIUM SATIVUM) BULBS COMPLEXED WITH ALPHA-D-MANNOSE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1KJ1

Classification: PLANT PROTEIN

Total Structure Weight: 50837.54

Macromolecule Entities
Molecule Chains Length Organism Details
lectin I A, P 109 Allium sativum Mutation: I3L, R5T, D7G, A39S, D46G, P48L, D106G, R109K
Gene Name(s): LECASAI3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
lectin II D, Q 109 Allium sativum Mutation: S43T
Gene Name(s): ASAII1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MAN
Query on MAN

A, D, P, Q ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.211
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 201.83 α = 90.00
b = 43.52 β = 112.26
c = 78.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-04
  • Released Date: 2002-02-22
  • Deposition author(s): Ramachandraiah, G., Chandra, N.R., Surolia, A., Vijayan, M.

Revision History

  • Version 1_0: 2002-02-22

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance