1KGZ

Crystal Structure Analysis of the Anthranilate Phosphoribosyltransferase from Erwinia carotovora (current name, Pectobacterium carotovorum)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1KGZ

Classification: TRANSFERASE

Total Structure Weight: 75515.30

Macromolecule Entities
Molecule Chains Length Organism Details
Anthranilate phosphoribosyltransferase A, B 345 Pectobacterium carotovorum EC#: 2.4.2.18 IUBMB
Gene Name(s): trpD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PRP
Query on PRP

A, B ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID
C5 H13 O14 P3
PQGCEDQWHSBAJP-TXICZTDVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HG
Query on HG

A, B MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, B MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.214
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 77.38 α = 90.00
b = 81.69 β = 90.00
c = 101.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-28
  • Released Date: 2002-10-23
  • Deposition author(s): Kim, C., Xuong, N.-H., Edwards, S., Madhusudan, Yee, M.-C., Spraggon, G., Mills, S.E.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance