1JZT

Crystal structure of yeast ynu0, YNL200c

Structural Biology Knowledgebase: 1JZT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1JZT

Classification: structural genomics unknown function

Total Structure Weight: 55554.27

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical 27.5 kDa protein in SPX19-GCR2 intergenic region A, B 246 Saccharomyces cerevisiae Mutation: M1M, M20M, M32M, M149M
Gene Name(s): YNL200C N1370
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.94 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.200
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.73 α = 90.00
b = 68.68 β = 90.00
c = 125.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-17
  • Released Date: 2001-09-26
  • Deposition author(s): Jiang, J.-S., Manning, N.O., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2014-11-26
    Type: Other | Details: Correct solvent content
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values