1JXQ

Structure of cleaved, CARD domain deleted Caspase-9

Structural Biology Knowledgebase: 1JXQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.233

Literature

Macromolecules
Sequence Display for 1JXQ

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 126795.45

Macromolecule Entities
Molecule Chains Length Organism Details
Caspase-9 A, B, C, D 284 Homo sapiens EC#: 3.4.22.62 IUBMB
Gene Name(s): CASP9 Gene View MCH6
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
benzoxycarbonyl-Val-Ala-Asp-fluoromethyl ketone Inhibitor E, F 5 synthetic

Small Molecules
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
PHQ
Query on PHQ
E, F NON-POLYMER C8 H7 Cl O2 --
CF0
Query on CF0
E, F NON-POLYMER C H3 F --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.233
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 144.30 α = 90.00
b = 81.80 β = 111.70
c = 125.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-08
  • Released Date: 2001-12-12
  • Deposition author(s): Renatus, M., Stennicke, H.R., Scott, F.L., Liddington, R.C., Salvesen, G.S.

Revision History

  • 2011-07-13
    Type: Linkage | Details: Linkage
  • 2011-07-13
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-13
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-13
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Function and keywords | Details: Function and keywords