1JVU

CRYSTAL STRUCTURE OF RIBONUCLEASE A (COMPLEXED FORM)

Structural Biology Knowledgebase: 1JVU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1JVU

Classification: HYDROLASE

Total Structure Weight: 27739.99

Macromolecule Entities
Molecule Chains Length Organism Details
RIBONUCLEASE A A, B 124 Bos taurus EC#: 3.1.27.5 IUBMB
Details: COMPLEXED WITH CYTIDINE-2'-MONOPHOSPHATE
Gene Name(s): RNASE1 Gene View RNS1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C2P
Query on C2P

A CYTIDINE-2'-MONOPHOSPHATE
C9 H14 N3 O8 P
YQUAKORMLHPSLZ-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
C2P Ki: 7000 nM (100) BindingDB

N/A in BindingMoad
Ki: 7000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 101.08 α = 90.00
b = 33.43 β = 90.90
c = 73.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-31
  • Released Date: 2002-06-05
  • Deposition author(s): Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4