1JVG

CRYSTAL STRUCTURE OF HUMAN AGX2 COMPLEXED WITH UDPGALNAC


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1JVG

Classification: TRANSFERASE

Total Structure Weight: 118892.28

Macromolecule Entities
Molecule Chains Length Organism Details
GLCNAC1P URIDYLTRANSFERASE A, B 522 Homo sapiens EC#: 2.7.7.23 IUBMB
Mutation: S445G, Q454S
Gene Name(s): UAP1 Gene View SPAG2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UD2
Query on UD2

A, B URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
3R, (Synonym)
C17 H27 N3 O17 P2
LFTYTUAZOPRMMI-NESSUJCYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.201
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 85.58 α = 90.00
b = 71.79 β = 94.01
c = 93.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-30
  • Released Date: 2002-08-30
  • Deposition author(s): Peneff, C., Bourne, Y.

Revision History

  • Version 1_0: 2002-08-30

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance