1JTW

Structure of SL4 RNA from the HIV-1 Packaging Signal


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 20
  • Conformers Submitted: 14
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 1JTW

Classification: RNA

Total Structure Weight: 5577.03

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP*GP*UP*GP*CP*GP*AP*GP*AP*GP*CP*GP*UP*CP*A)-3' A 16 synthetic HIV-1 packaging signal SL4 hairpin

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 20
  • Conformers Submitted: 14
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-22
  • Released Date: 2001-12-12
  • Deposition author(s): Kerwood, D.J., Cavaluzzi, M.J., Borer, P.N.

Revision History

  • Version 1_0: 2001-12-12

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance