1JTV

Crystal structure of 17beta-Hydroxysteroid Dehydrogenase Type 1 complexed with Testosterone

Structural Biology Knowledgebase: 1JTV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1JTV

Classification: OXIDOREDUCTASE

Total Structure Weight: 35268.63

Macromolecule Entities
Molecule Chains Length Organism Details
17 beta-hydroxysteroid dehydrogenase type 1 A 327 Homo sapiens EC#: 1.1.1.62 IUBMB
Gene Name(s): HSD17B1 Gene View E17KSR EDH17B1 EDH17B2 EDHB17 SDR28C1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TES
Query on TES

A TESTOSTERONE
C19 H28 O2
MUMGGOZAMZWBJJ-DYKIIFRCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.196
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 122.37 α = 90.00
b = 43.94 β = 99.24
c = 60.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-22
  • Released Date: 2003-06-24
  • Deposition author(s): Shi, R., Nahoum, V., Lin, S.X.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values