1JS1

Crystal Structure of a new transcarbamylase from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution

Structural Biology Knowledgebase: 1JS1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1JS1

Classification: TRANSFERASE

Total Structure Weight: 112112.49

Macromolecule Entities
Molecule Chains Length Organism Details
Transcarbamylase X, Y, Z 324 Bacteroides fragilis EC#: 2.1.3 IUBMB
Gene Name(s): argF' BT_3717
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

X, Y, Z PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.206
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 153.41 α = 90.00
b = 153.41 β = 90.00
c = 94.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-15
  • Released Date: 2002-07-17
  • Deposition author(s): Shi, D., Gallegos, R., DePonte III, J., Morizono, H., Yu, X., Allewell, N.M., Malamy, M., Tuchman, M.

Revision History

  • 2013-03-06
    Type: Data collection | Details: Remove incorrect completeness value
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4