1JQI

Crystal Structure of Rat Short Chain Acyl-CoA Dehydrogenase Complexed With Acetoacetyl-CoA

Structural Biology Knowledgebase: 1JQI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 1JQI

Classification: OXIDOREDUCTASE

Total Structure Weight: 87713.45

Macromolecule Entities
Molecule Chains Length Organism Details
short chain acyl-CoA dehydrogenase A, B 388 Rattus norvegicus EC#: 1.3.8.1 IUBMB
Gene Name(s): Acads
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CAA
Query on CAA

A, B ACETOACETYL-COENZYME A
C25 H40 N7 O18 P3 S
OJFDKHTZOUZBOS-CITAKDKDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.168
  • Space Group: P 3 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 143.61 α = 90.00
b = 143.61 β = 90.00
c = 77.46 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-07
  • Released Date: 2002-02-13
  • Deposition author(s): Battaile, K.P., Molin-Case, J., Paschke, R., Wang, M., Bennett, D., Vockley, J., Kim, J.-J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values