1JNY

Crystal structure of Sulfolobus solfataricus elongation factor 1 alpha in complex with GDP

Structural Biology Knowledgebase: 1JNY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1JNY

Classification: TRANSLATION

Total Structure Weight: 97965.61

Macromolecule Entities
Molecule Chains Length Organism Details
Elongation factor 1-alpha A, B 435 Sulfolobus solfataricus Mutation: I15V, A196S, R203K, I347L
Gene Name(s): tuf tef1 SSO0216
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.220
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.11 α = 90.00
b = 113.72 β = 90.20
c = 80.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-26
  • Released Date: 2002-01-23
  • Deposition author(s): Vitagliano, L., Masullo, M., Sica, F., Zagari, A., Bocchini, V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4