1JNQ

LIPOXYGENASE-3 (SOYBEAN) COMPLEX WITH EPIGALLOCATHECHIN (EGC)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 1JNQ

Classification: OXIDOREDUCTASE

Total Structure Weight: 97281.11

Macromolecule Entities
Molecule Chains Length Organism Details
lipoxygenase-3 A 857 Glycine max EC#: 1.13.11.58 IUBMB
Gene Name(s): LOX1.3 LOX3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Lipoxygenases

Protein Name: Lipoxygenase-L3 from soybeans


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EGT
Query on EGT

A 2-(3,4,5-TRIHYDROXY-PHENYL)-CHROMAN-3,5,7- TRIOL
EPIGALLOCATECHIN (Synonym)
C15 H14 O7
XMOCLSLCDHWDHP-IUODEOHRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.199
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 112.73 α = 90.00
b = 137.27 β = 95.53
c = 61.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-24
  • Released Date: 2003-06-03
  • Deposition author(s): Zhou, K., Skrzypczak-Jankun, E., Jankun, J.

Revision History

  • 2007-10-16
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance