1JIX

T4 Phage BGT in Complex with Ca2+

Structural Biology Knowledgebase: 1JIX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1JIX

Classification: TRANSFERASE

Total Structure Weight: 41164.52

Macromolecule Entities
Molecule Chains Length Organism Details
DNA BETA-GLUCOSYLTRANSFERASE A 351 Enterobacteria phage t4 sensu lato EC#: 2.4.1.27 IUBMB
Gene Name(s): bgt
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UDP
Query on UDP

A URIDINE-5'-DIPHOSPHATE
C9 H14 N2 O12 P2
XCCTYIAWTASOJW-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.200
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 47.94 α = 90.00
b = 71.45 β = 91.36
c = 62.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-03
  • Released Date: 2001-08-15
  • Deposition author(s): Morera, S., Lariviere, L., Kurzeck, J., Aschke-Sonnenborn, U., Freemont, P.S., Janin, J., Ruger, W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4