1JH6

Semi-reduced Cyclic Nucleotide Phosphodiesterase from Arabidopsis thaliana

Structural Biology Knowledgebase: 1JH6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1JH6

Classification: HYDROLASE

Total Structure Weight: 43405.09

Macromolecule Entities
Molecule Chains Length Organism Details
cyclic phosphodiesterase A, B 189 Arabidopsis thaliana EC#: 3.1.4 IUBMB
Gene Name(s): At4g18930 F13C5.100 F13C5_100
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.192
  • Space Group: H 3 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.38 α = 90.00
b = 99.38 β = 90.00
c = 175.06 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-06-27
  • Released Date: 2002-02-06
  • Deposition author(s): Hofmann, A., Grella, M., Botos, I., Filipowicz, W., Wlodawer, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values