1JBC

CONCANAVALIN A

Structural Biology Knowledgebase: 1JBC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1JBC

Classification: LECTIN

Total Structure Weight: 25717.59

Macromolecule Entities
Molecule Chains Length Organism Details
CONCANAVALIN A A 237 Canavalia ensiformis Mutation: L97T, F98G, P100Y, I101K, F102E, F105T, T107L, M108S, F109W, L110S, M111F, V112T, V113S, N114K, K115L, V116K, S118N, E151D, R155E
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Observed:
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 61.95 α = 90.00
b = 86.05 β = 90.00
c = 89.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-08-23
  • Released Date: 1997-02-12
  • Deposition author(s): Parkin, S., Rupp, B., Hope, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4