1J98

The 1.2 Angstrom Structure of Bacillus subtilis LuxS

Structural Biology Knowledgebase: 1J98 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.146
  • R-Value Work: 0.126

Literature

Macromolecules
Sequence Display for 1J98

Classification: SIGNALING PROTEIN

Total Structure Weight: 17855.73

Macromolecule Entities
Molecule Chains Length Organism Details
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS A 157 Bacillus subtilis EC#: 4.4.1.21 IUBMB
Mutation: C84X, P96T
Gene Name(s): luxS ytjB BSU30670
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
OCS
Query on OCS
A L-PEPTIDE LINKING C3 H7 N O5 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.146
  • R-Value Work: 0.126
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 62.78 α = 90.00
b = 62.78 β = 90.00
c = 149.58 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-24
  • Released Date: 2001-06-06
  • Deposition author(s): Ruzheinikov, S.N., Das, S.K., Sedelnikova, S.E., Hartley, A., Foster, S.J., Horsburgh, M.J., Cox, A.G., McCleod, C.W., Mekhalfia, A., Blackburn, G.M., Rice, D.W., Baker, P.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values