1J2G

Crystal structure of Urate oxidase from Bacillus SP. TB-90 co-crystallized with 8-Azaxanthine

Structural Biology Knowledgebase: 1J2G SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1J2G

Classification: OXIDOREDUCTASE

Total Structure Weight: 147322.98

Macromolecule Entities
Molecule Chains Length Organism Details
Uricase A, B, C, D 319 Bacillus sp. tb-90 EC#: 1.7.3.3 IUBMB
Fragment: RESIDUES 1-319
Gene Name(s): uao
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AZA
Query on AZA

A, B, C, D 8-AZAXANTHINE
C4 H3 N5 O2
KVGVQTOQSNJTJI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.180
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 133.39 α = 90.00
b = 144.41 β = 90.00
c = 78.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-05
  • Released Date: 2004-06-15
  • Deposition author(s): Hibi, T., Nago, T., Nishiya, Y., Oda, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor