1J0A

Crystal Structure Analysis of the ACC deaminase homologue


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1J0A

Classification: LYASE

Total Structure Weight: 106788.18

Macromolecule Entities
Molecule Chains Length Organism Details
1-aminocyclopropane-1-carboxylate deaminase A, B, C 325 Pyrococcus horikoshii EC#: 3.5.99.7 IUBMB
Gene Name(s): PH0054 PHBE027
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A, B, C PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.201
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 122.34 α = 90.00
b = 122.34 β = 90.00
c = 115.03 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-12
  • Released Date: 2003-05-12
  • Deposition author(s): Fujino, A., Ose, T., Honma, M., Yao, M., Tanaka, I.

Revision History

  • Version 1_0: 2003-05-12

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Source and taxonomy, Version format compliance