1IVY

PHYSIOLOGICAL DIMER HPP PRECURSOR

Structural Biology Knowledgebase: 1IVY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1IVY

Classification: CARBOXYPEPTIDASE

Total Structure Weight: 104264.33

Macromolecule Entities
Molecule Chains Length Organism Details
HUMAN PROTECTIVE PROTEIN A, B 452 Homo sapiens EC#: 3.4.16.5 IUBMB
Gene Name(s): CTSA Gene View PPGB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.213
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 115.04 α = 90.00
b = 148.11 β = 90.00
c = 80.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-06-12
  • Released Date: 1997-04-21
  • Deposition author(s): Rudenko, G., Bonten, E., D'Azzo, A., Hol, W.G.J.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4