1IRI

Crystal structure of human autocrine motility factor complexed with an inhibitor

Structural Biology Knowledgebase: 1IRI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1IRI

Classification: ISOMERASE

Total Structure Weight: 253722.86

Macromolecule Entities
Molecule Chains Length Organism Details
autocrine motility factor A, B, C, D 558 Homo sapiens EC#: 5.3.1.9 IUBMB
Gene Name(s): GPI Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
E4P
Query on E4P

A, B, C, D ERYTHOSE-4-PHOSPHATE
C4 H9 O7 P
NGHMDNPXVRFFGS-IUYQGCFVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.193
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 80.65 α = 90.00
b = 107.77 β = 90.00
c = 270.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-10-08
  • Released Date: 2002-06-05
  • Deposition author(s): Tanaka, N., Haga, A., Uemura, H., Akiyama, H., Funasaka, T., Nagase, H., Raz, A., Nakamura, K.T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4