1IQY

CRYSTAL STRUCTURE OF NICKEL-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS

Structural Biology Knowledgebase: 1IQY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1IQY

Classification: OXIDOREDUCTASE

Total Structure Weight: 141624.27

Macromolecule Entities
Molecule Chains Length Organism Details
AMINE OXIDASE A, B 638 Arthrobacter globiformis EC#: 1.4.3.21 IUBMB
Mutation: Y382X
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A, B NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TPQ
Query on TPQ
A, B L-PEPTIDE LINKING C9 H9 N O5 TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.208
  • Space Group: I 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 157.80 α = 90.00
b = 62.84 β = 111.80
c = 184.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-28
  • Released Date: 2003-02-04
  • Deposition author(s): Kishishita, S., Okajima, T., Mure, M., Kim, M., Yamaguchi, H., Hirota, S., Kuroda, S., Tanizawa, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4