1IDT

STRUCTURAL STUDIES ON A PRODRUG-ACTIVATING SYSTEM-CB1954 AND FMN-DEPENDENT NITROREDUCTASE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 1IDT

Classification: OXIDOREDUCTASE

Total Structure Weight: 49291.42

Macromolecule Entities
Molecule Chains Length Organism Details
MINOR FMN-DEPENDENT NITROREDUCTASE A, B 217 Escherichia coli EC#: 5.4.99.5 IUBMB
Gene Name(s): nfsB dprA nfnB nfsI ntr b0578 JW0567
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CB1
Query on CB1

A 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE
CB1954 (Synonym)
C9 H8 N4 O5
WOCXQMCIOTUMJV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.225
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 57.56 α = 90.00
b = 57.56 β = 90.00
c = 266.13 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-04-05
  • Released Date: 2003-09-16
  • Deposition author(s): Johansson, E., Parkinson, G.N., Denny, W.A., Neidle, S.

Revision History

  • Version 1_0: 2003-09-16

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description