1I8P

STRUCTURE DETERMINATION OF THE FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS

Structural Biology Knowledgebase: 1I8P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.161

Literature

Macromolecules
Sequence Display for 1I8P

Classification: ELECTRON TRANSPORT

Total Structure Weight: 51222.40

Macromolecule Entities
Molecule Chains Length Organism Details
CYTOCHROME C2 A, B, C, D 114 Rhodopseudomonas palustris Mutation: Q1X, G29A, I64V, N65P, N68A, D80E
Gene Name(s): cycA RPA1535
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A, B, C, D HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A, B, C, D L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.161
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 50.12 α = 90.00
b = 71.71 β = 93.67
c = 67.36 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-03-15
  • Released Date: 2001-04-04
  • Deposition author(s): Garau, G., Geremia, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4