1I75

CRYSTAL STRUCTURE OF CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP.#1011 COMPLEXED WITH 1-DEOXYNOJIRIMYCIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.154

Literature

Macromolecules
Sequence Display for 1I75

Classification: TRANSFERASE

Total Structure Weight: 151273.17

Macromolecule Entities
Molecule Chains Length Organism Details
CYCLODEXTRIN GLUCANOTRANSFERASE A, B 686 Bacillus sp. EC#: 2.4.1.19 IUBMB
Mutation: R452P, A454G
Gene Name(s): cgt
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NOJ
Query on NOJ

A, B 1-DEOXYNOJIRIMYCIN
MORANOLINE (Synonym)
C6 H13 N O4
LXBIFEVIBLOUGU-JGWLITMVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.154
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 64.78 α = 85.03
b = 74.24 β = 104.88
c = 79.03 γ = 101.02

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-03-08
  • Released Date: 2001-04-11
  • Deposition author(s): Kanai, R., Haga, K., Yamane, K., Harata, K.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Non-polymer description, Version format compliance