1I5K

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN

Structural Biology Knowledgebase: 1I5K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 1I5K

Classification: BLOOD CLOTTING

Total Structure Weight: 26820.09

Macromolecule Entities
Molecule Chains Length Organism Details
PLASMINOGEN A, B 84 Homo sapiens EC#: 3.4.21.7 IUBMB
Fragment: MODIFIED RECOMBINANT KRINGLE-2 DOMAIN
Mutation: C4G, E56D, L72Y, T79A, T80A
Gene Name(s): PLG Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
M PROTEIN C, D 30 Streptococcus pyogenes Fragment: VEK-30 (30 RESIDUE INTERNAL PEPTIDE)
Mutation: R330Y
Gene Name(s): pam emm
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.195
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 91.98 α = 90.00
b = 91.98 β = 90.00
c = 151.78 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-27
  • Released Date: 2001-08-01
  • Deposition author(s): Rios-Steiner, J.L., Schenone, M., Mochalkin, I., Tulinsky, A., Castellino, F.J.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4