1I5G

TRYPAREDOXIN II COMPLEXED WITH GLUTATHIONYLSPERMIDINE

Structural Biology Knowledgebase: 1I5G SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 1I5G

Classification: ELECTRON TRANSPORT

Total Structure Weight: 16780.36

Macromolecule Entities
Molecule Chains Length Organism Details
TRYPAREDOXIN II A 144 Crithidia fasciculata Mutation: C44S
Gene Name(s): txnII
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TS5
Query on TS5

A GLUTATHIONYLSPERMIDINE
C17 H34 N6 O5 S
NEDQLXHBVHSKNV-STQMWFEESA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.168
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.21 α = 90.00
b = 50.51 β = 90.00
c = 67.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-27
  • Released Date: 2001-03-14
  • Deposition author(s): Hofmann, B., Budde, H., Bruns, K., Guerrero, S.A., Kalisz, H.M., Menge, U., Montemartini, M., Nogoceke, E., Steinert, P., Wissing, J.B., Flohe, L., Hecht, H.-J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4