1I38

CRYSTAL STRUCTURE OF THE RAT ANDROGEN RECEPTOR LIGAND BINDING DOMAIN T877A MUTANT COMPLEX WITH DIHYDROTESTOSTERONE

Structural Biology Knowledgebase: 1I38 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.345
  • R-Value Work: 0.280

Literature

Macromolecules
Sequence Display for 1I38

Classification: HORMONE / GROWTH FACTOR

Total Structure Weight: 30543.03

Macromolecule Entities
Molecule Chains Length Organism Details
ANDROGEN RECEPTOR A 260 Rattus norvegicus Fragment: LIGAND-BINDING DOMAIN
Gene Name(s): Ar Nr3c4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHT
Query on DHT

A 5-ALPHA-DIHYDROTESTOSTERONE
C19 H30 O2
NVKAWKQGWWIWPM-ABEVXSGRSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
DHT EC50: 0.05 - 20 nM (99) BindingDB
IC50: 0 nM (99) BindingDB
Ki: 0.2 - 10 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.345
  • R-Value Work: 0.280
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.01 α = 90.00
b = 65.71 β = 90.00
c = 70.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-13
  • Released Date: 2001-03-21
  • Deposition author(s): Sack, J.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4