1I1P

REFINEMENT INCLUDING EXPERIMENTAL MAD PHASES ALLOWS AN EXHAUSTIVE STUDY OF ORDERED SOLVENT MOLECULES FOR A PLATINATED DECANUCLEOTIDE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 1I1P

Classification: DNA

Total Structure Weight: 6593.38

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*TP*CP*GP*CP*TP*CP*TP*C)-3' A 10 synthetic
5'-D(*GP*AP*GP*AP*GP*CP*GP*AP*GP*G)-3' B 10 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CPT
Query on CPT

A Cisplatin
diammine(dichloro)platinum (Synonym)
Cl2 H6 N2 Pt
LXZZYRPGZAFOLE-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SPM
Query on SPM

B SPERMINE
C10 H26 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.159
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 42.89 α = 90.00
b = 29.98 β = 95.98
c = 46.57 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-02
  • Released Date: 2002-06-21
  • Deposition author(s): Coste, F., Shepard, W., Zelwer, C.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Non-polymer description, Version format compliance