1HU9

LIPOXYGENASE-3 (SOYBEAN) COMPLEX WITH 4-HYDROPEROXY-2-METHOXY-PHENOL

Structural Biology Knowledgebase: 1HU9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1HU9

Classification: OXIDOREDUCTASE

Total Structure Weight: 97131.82

Macromolecule Entities
Molecule Chains Length Organism Details
LIPOXYGENASE-3 A 857 Glycine max EC#: 1.13.11.58 IUBMB
Mutation: H25D, P57S, L112P, V201I, E382D, G428D, A630T
Details: COMPLEX WITH 4-HYDROPEROXY-2-METHOXY-PHENOL A PHOTODEGREDATION PRODUCT OF CURCUMIN
Gene Name(s): LOX1.3 LOX3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Lipoxygenases

Protein Name: Lipoxygenase-L3 from soybeans


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4HM
Query on 4HM

A 4-HYDROPEROXY-2-METHOXY-PHENOL
C7 H8 O4
DNBCLSZROQUYQN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.185
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 112.79 α = 90.00
b = 137.32 β = 95.55
c = 61.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-04
  • Released Date: 2003-06-03
  • Deposition author(s): Zhou, K., Skrzypczak-Jankun, E., McCabe, N.P., Selman, S.H., Jankun, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4