1HOV

SOLUTION STRUCTURE OF A CATALYTIC DOMAIN OF MMP-2 COMPLEXED WITH SC-74020

Structural Biology Knowledgebase: 1HOV SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 14
  • Conformers Submitted: 11
  • Selection Criteria: Structures with the Least Restraint Violations

Literature

Macromolecules
Sequence Display for 1HOV

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 19277.20

Macromolecule Entities
Molecule Chains Length Organism Details
MATRIX METALLOPROTEINASE-2 A 163 Homo sapiens EC#: 3.4.24.24 IUBMB
Fragment: CATALYTIC DOMAIN
Gene Name(s): MMP2 Gene View CLG4A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
I52
Query on I52

A N-{4-[(1-HYDROXYCARBAMOYL-2-METHYL-PROPYL)- (2-MORPHOLIN-4-YL-ETHYL)-SULFAMOYL]-4-PENTYL- BENZAMIDE
SC-74020 (Synonym)
C29 H42 N4 O6 S
YJNCFXPJICILOK-HHHXNRCGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
I52 IC50: <0.100000 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 14
  • Conformers Submitted: 11
  • Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-12-11
  • Released Date: 2001-12-12
  • Deposition author(s): Feng, Y., Likos, J.J., Zhu, L., Woodward, H., Munie, G., McDonald, J.J., Stevens, A.M., Howard, C.P., De Crescenzo, G.A., Welsch, D., Shieh, H.-S., Stallings, W.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4