1HL9

CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA ALPHA-FUCOSIDASE IN COMPLEX WITH A MECHANISM BASED INHIBITOR

Structural Biology Knowledgebase: 1HL9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 1HL9

Classification: HYDROLASE

Total Structure Weight: 104963.70

Macromolecule Entities
Molecule Chains Length Organism Details
PUTATIVE ALPHA-L-FUCOSIDASE A, B 449 Thermotoga maritima EC#: 3.2.1.51 IUBMB
Details: ORF TM0306
Gene Name(s): TM_0306
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FUF
Query on FUF

A, B 2-DEOXY-2-FLUORO-BETA-L-FUCOPYRANOSE
2,6-DIDEOXY-2-FLUORO-BETA-L-LYXO-HEXOPYRANOSE (Synonym)
C6 H11 F O4
IRKXGKIPOMIQOD-QYESYBIKSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
KCX
Query on KCX
A, B L-PEPTIDE LINKING C7 H14 N2 O4 LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.181
  • Space Group: H 3 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 172.16 α = 90.00
b = 172.16 β = 90.00
c = 167.33 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-14
  • Released Date: 2004-02-05
  • Deposition author(s): Sulzenbacher, G., Bignon, C., Bourne, Y., Henrissat, B.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4