1HJV

Crystal structure of hcgp-39 in complex with chitin tetramer

Structural Biology Knowledgebase: 1HJV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 1HJV

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 170019.69

Macromolecule Entities
Molecule Chains Length Organism Details
CHITINASE-3 LIKE PROTEIN 1 A, B, C, D 362 Homo sapiens Mutation: T311I, T311I
Gene Name(s): CHI3L1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B, C, D N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.75 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.212
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 108.64 α = 90.00
b = 123.32 β = 90.00
c = 135.49 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-28
  • Released Date: 2003-03-11
  • Deposition author(s): Houston, D.R., Recklies, A.D., Krupa, J.C., Van Aalten, D.M.F.

Revision History

  • 2012-08-22
    Type: Function and keywords | Details: KEYWDS
  • 2012-08-22
    Type: Other | Details: REMARK 100,REMARK 525,MASTER,HEADER,REMARK 900
  • 2012-08-22
    Type: Biological assembly | Details: REMARK 350
  • 2012-08-22
    Type: Version format compliance | Details: REMARK 4
  • 2012-08-22
    Type: Polymer description | Details: COMPND
  • 2012-08-22
    Type: Citation | Details: JRNL
  • 2012-08-22
    Type: Binding sites and description | Details: REMARK 800,SITE
  • 2012-08-22
    Type: Geometry validation | Details: REMARK 500