1HJC

CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER

Structural Biology Knowledgebase: 1HJC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.223

Literature

Macromolecules
Sequence Display for 1HJC

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 47026.53


Macromolecule Entities
Molecule Chains Length Organism Details
RUNT-RELATED TRANSCRIPTION FACTOR 1 A, D 123 Mus musculus Fragment: RESIDUES 60-182
Gene Name(s): Runx1 Aml1 Cbfa2 Pebp2ab
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3') B, E 16 Homo sapiens
DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3') C, F 16 Homo sapiens


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.223
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 51.09 α = 90.00
b = 104.07 β = 90.00
c = 116.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-01-11
  • Released Date: 2001-03-09
  • Deposition author(s): Tahirov, T.H., Ogata, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4